Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQAKIKNKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIRSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMVK
4A7X Chain:A ((7-240))
------NKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMVK
General information:
TITO was launched using:
RESULT:
Template:
4A7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170569 for 1937 contacts (-88.1/contact) +
2D Compatibility (PS) -25582 + (NN) -10269 + (LL) 804
1D Compatibility (HY) -34400 + (ID) 11650
Total energy: -251666.0 ( -129.93 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_4A7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A7X-query.scw
PDB file :
Tito_Scwrl_4A7X.pdb
: