Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRLEVSNQAKLPTQFGEFCIQCFREKGSNGSKDHLVIFTPNFP-QNP-LVRLHSECLTGDALGSQKCDCGGALQMALERISKEG-GLVIYLRQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEKYA--EVTRESLIVCANEHNQGYLEVKKLKMGHLL
2BZ1 Chain:A ((8-174))
--------EAKLPTPWGDFLMVGFEELAT--GHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVG--------------------
General information:
TITO was launched using:
RESULT:
Template:
2BZ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104862 for 1326 contacts (-79.1/contact) +
2D Compatibility (PS) -17477 + (NN) -5289 + (LL) 1928
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -146050.0 ( -110.14 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2BZ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BZ1-query.scw
PDB file :
Tito_Scwrl_2BZ1.pdb
: