Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNTQGHAC------GLDELDALEILGYVPK--DSLEKANFYAPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE
4EI9 Chain:A ((236-311))
------------------------------------------------------------------ASEFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKSALSIVTSPLRAGRLYNFSFLNQMENFLKERTPYV
General information:
TITO was launched using:
RESULT:
Template:
4EI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5750 for 300 contacts (-19.2/contact) +
2D Compatibility (PS) -6764 + (NN) 4006 + (LL) 6624
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -6084.0 ( -20.28 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_4EI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EI9-query.scw
PDB file :
Tito_Scwrl_4EI9.pdb
: