Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVITGASSGIGLECVLMLLN---QGYKVYALSR---------HATLCVALNHALCECVDIDVSDSNALKEVFLNISAKEDHCDVLINSAGYGVFGSVEDTPIEEVKKQFSVNFFALCEVVQLCLPLLKNKPYSKIFNLSSIAGRVSMLFLGHYSASKHALEAYSDALRLELKPFNVQVCLIEPGPVKSNWEKTAFENDERKDSVYALEVNAAKSFYSGVYQK-------ALNAKEVAQKIVFLSMSHKIKARYLIGLKTQLLLALYQILPSSWYDSLFRLVVLGRKRDA |
| 1FDW Chain:A ((6-265)) | --LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA-----GSPEEVLDRT---DIHTFHRFYQYLAQSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFT---TERFLPLLRMRLDDPSGSNYVTAMHREVFG- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158554 for 1830 contacts (-86.6/contact) +
2D Compatibility (PS) -24559 + (NN) -7463 + (LL) 1736
1D Compatibility (HY) -15600 + (ID) 3800
Total energy: -208240.0 ( -113.79 by residue)
QMean score : 0.502
|
|
|