Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIIN----APYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVY---------FFMGNRKNSGANLARMILWVLQIILPFLTL------------LLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
| 4IL3 Chain:A ((249-444)) | -------------------------------------------------------------------------------------------------------------------------KIFVIDGSKRSSHSNAYFTGLPFTSKRIVLFDTLVNSNSTDEITAVLAHEIGHWQKNHIVNMVIFSQLHTFLIFSLFTSIYRNSSFYNTF---------SGFVDPVITKEFPIIIGFMLFNDLLTPLECAMQFIMSLISRTHEYQADAYAKKLGYKQN-LCRALIDL----------QIKNLSTMNVDPLYSSYHYS-HPTLAERLTALD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37942 for 1013 contacts (-37.5/contact) +
2D Compatibility (PS) -17373 + (NN) -5148 + (LL) 12500
1D Compatibility (HY) -14400 + (ID) 2300
Total energy: -64663.0 ( -63.83 by residue)
QMean score : 0.143
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