Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGEIAFKYDAQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDG-GASFVINKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP
3ZSF Chain:A ((39-273))
--------------------GSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSN-IKSIADIKGVKTAQSLTSNYGEKAKAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ
General information:
TITO was launched using:
RESULT:
Template:
3ZSF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121138 for 1898 contacts (-63.8/contact) +
2D Compatibility (PS) -25491 + (NN) -14361 + (LL) 1900
1D Compatibility (HY) -21200 + (ID) 6450
Total energy: -186740.0 ( -98.39 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3ZSF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZSF-query.scw
PDB file :
Tito_Scwrl_3ZSF.pdb
: