Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEAIAIK
1XRG Chain:A ((34-156))
--EVVKTNKAPEAIGPYSQAIVTGSFVYTSGQIPINPQTGEVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFSEPYPARSCVEVSKLPKGVLIEIEAVAIK
General information:
TITO was launched using:
RESULT:
Template:
1XRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50688 for 945 contacts (-53.6/contact) +
2D Compatibility (PS) -13127 + (NN) -3315 + (LL) 272
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -83258.0 ( -88.10 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_1XRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRG-query.scw
PDB file :
Tito_Scwrl_1XRG.pdb
: