Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEIKTLLVDFFPQAKHFGIILIKAIVVFCIGFYFSFFLRNKTMKLL-SKK-DEILANFVAQVTFILILIITTIIALSTLGVQTTSIITVLGTVGIAVALALKDYLSSIAGGIILIILHPFKKGDIIEISGLEGKVEALNFFNTSLRLHDGRLAVLPNRSVANSNIINSNNTACRRIEWVCGVGYGSDIELVHKTIKDVIDGMEKIDKNMPTFIGITDFGQSSLNFTIRVWAKIEDGIFNVRSELIERIKNALDANRIEIPFNKLDISINKQDSSK
2OAU Chain:A ((27-280))
-----------------YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGD-LQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV----
General information:
TITO was launched using:
RESULT:
Template:
2OAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153865 for 1628 contacts (-94.5/contact) +
2D Compatibility (PS) -26364 + (NN) -8068 + (LL) 1280
1D Compatibility (HY) -29200 + (ID) 4250
Total energy: -220467.0 ( -135.42 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_2OAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OAU-query.scw
PDB file :
Tito_Scwrl_2OAU.pdb
: