Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKA----KLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
1ZCM Chain:A ((209-266))
-ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYRGQVVSLIRMRNPWGEVEWTGAW
General information:
TITO was launched using:
RESULT:
Template:
1ZCM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6949 for 259 contacts (26.8/contact) +
2D Compatibility (PS) -5637 + (NN) 366 + (LL) 208
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -3014.0 ( -11.64 by residue)
QMean score : -0.043
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCM-query.scw
PDB file :
Tito_Scwrl_1ZCM.pdb
: