Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSVIIIESPNKVAKIREITG--AKVFATIGHFMQLK----SYDENNGFKPTFDYDQEKKKHIFEMIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALLFENTNRQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREIEKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKACLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEA--------GLITYIRTDAESLSVEFLDETESFYAPIYKDLYL-KREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNANITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKKELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLSTIKRNAPSAYKEADFVKLLENKGIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQMEEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNLSEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKKHNVKLPKGFKYSMKVCGDFINEYHKK |
| 2GAJ Chain:A ((9-527)) | -----IVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHI-ARVTNTLGRKNRIVFSEITPRVIREAVKNP---REIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKS--NLSAGRVQSATLKLVCDREREILRF--VP---KKYHRITVNF-DGLTAEIDVK-------EKKFFD-AETLKEIQSIDE---LVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEYVG-------------AHEAIRPTNVFMTPE-EAGKY----LNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYR----------FKGTVLKKIFDGYE----KVWKTERNTGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYI---KKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVVDFPTNQKCSCGKEMRLSFGKYGFYLKCECGKTRSVKNDEIAVIDDGKIFL----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154089 for 3953 contacts (-39.0/contact) +
2D Compatibility (PS) -50949 + (NN) 2538 + (LL) 6444
1D Compatibility (HY) -30800 + (ID) 8450
Total energy: -235306.0 ( -59.53 by residue)
QMean score : 0.357
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