Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKKYAISNGFDPMFKFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSRYKQD------IVLLLKGKGPDEKKIKLLAQKLGVKTEFGFVNSH---ELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLF----EPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3C48 Chain:A ((246-428)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAFVGRLQPFKGPQVLIKAVA-ALFDRDPDRNLRVIICGGPS----DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASG-TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL---LDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETHHG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77908 for 1323 contacts (-58.9/contact) +
2D Compatibility (PS) -18186 + (NN) -11325 + (LL) 15244
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -104825.0 ( -79.23 by residue)
QMean score : 0.512
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