Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPKD-----RRIGIDIEPKRDGF------IQCDFLNYKLPVHQKVICLGNPPFGHRGVMALEFINHARNCDFVCFILPMFFESQGKGSIKYRVKGLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
2ADM Chain:A ((36-109)) | ---------------------------------------------------EAPRGGRVLEPACAHGPFLRAFREAHGTGYRFVGVEIDPKALDLPPWAEGILADFLLWE-PGEAFDLILGNPPYGIVGVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ADM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20841 for 385 contacts (-54.1/contact) +
2D Compatibility (PS) -6899 + (NN) -6353 + (LL) 4048
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -35245.0 ( -91.55 by residue)
QMean score : 0.295
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