Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLNKKDEQAIDLNLEDLPSEKKNEKIEKVTEKQGDFLEPKEEPKEEPEESLEDIFSSLNDFQEKTDKNAQKDEQKNEQEEQRRLREQQRLKQNQENQEMLKGLQQNLNQF-TQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFYHKASVSVLIMITKDGEFDYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGGNMISIKVNFTTKEEQ |
4WXA Chain:D ((74-112)) | ------------------------------------------------------------------------------------------------------------------------------------------LTGLQDDINEFLTGRMELAKNK-------KKAGADEKRIQE---EINQL----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12019 for 137 contacts (87.7/contact) +
2D Compatibility (PS) -4076 + (NN) -2088 + (LL) 15916
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 18771.0 ( 137.01 by residue)
QMean score : 0.348
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