Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHLDRQSLEKAKHLIQSGLIDTIEVGAIKGLQEIHRFLFEGLYEFAGKIRDKNIS--NFRFANCLYLDLILPRMESMPQNNFNQIIEKYVEMNIAHPFLEGNGRATRIWLDLLLKKELKKIALWDRIDKAAYLSAIKRSPVNDLEIKTLLKKHLSSNINDSLTFIKGITQSYYYEGL
3S6A Chain:A ((11-184))
--IDEQSLHNARRLFESGDIDRIEVGTTAGLQQIHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVDNREIIFKGIEQSYYYEGY
General information:
TITO was launched using:
RESULT:
Template:
3S6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82956 for 1311 contacts (-63.3/contact) +
2D Compatibility (PS) -18306 + (NN) -7331 + (LL) 252
1D Compatibility (HY) -21200 + (ID) 5200
Total energy: -134741.0 ( -102.78 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_3S6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S6A-query.scw
PDB file :
Tito_Scwrl_3S6A.pdb
: