Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGEL----FKITTTSNTTYHAKFVVVAIGKMG--QPNR-PTTYKIPVALSKQVVFSINDCKE--NEKTLVIGGGNSAVEYAIALCKTTPT-TLNYRKKEFSRINEDNAKNLQEVLDNNTLKSKLGVDIESLEEDN---TQIKVNFTDNTSESF--DRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 3AB1 Chain:A ((13-304)) | ---DMRDLTIIGGGPTGIFAAFQCGMNNIS-CRIIESMPQLGGQLAALYP---------EKHIYDVAG---FPEVPAIDLVESL--WAQAERYNPDVVLN-ETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAG-LGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-HGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLEL--YENALVVDSHMKT-SVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114176 for 2087 contacts (-54.7/contact) +
2D Compatibility (PS) -28844 + (NN) 1387 + (LL) 916
1D Compatibility (HY) -20000 + (ID) 3700
Total energy: -164417.0 ( -78.78 by residue)
QMean score : 0.438
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