Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
1PR1 Chain:A ((3-231))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDH-----------RQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
1PR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182062 for 1892 contacts (-96.2/contact) +
2D Compatibility (PS) -22772 + (NN) -5186 + (LL) 1128
1D Compatibility (HY) -24400 + (ID) 6050
Total energy: -239342.0 ( -126.50 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1PR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR1-query.scw
PDB file :
Tito_Scwrl_1PR1.pdb
: