Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEVNFNDFIVVDVRELDEYEELHLPNATLISVND-QEKLADFLSQHKDQKVLLHC--RAGRRALDAAKSMHELGYTPYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
3O3W Chain:A ((35-128))
-IADLSIDIKK-GYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLS--KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRKENG--------------
General information:
TITO was launched using:
RESULT:
Template:
3O3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46001 for 651 contacts (-70.7/contact) +
2D Compatibility (PS) -10102 + (NN) -3810 + (LL) 1152
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -65811.0 ( -101.09 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_3O3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O3W-query.scw
PDB file :
Tito_Scwrl_3O3W.pdb
: