Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDD------DIK--TAEQQNASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
2ZKW Chain:A ((53-105))
-VHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG
General information:
TITO was launched using:
RESULT:
Template:
2ZKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4982 for 176 contacts (28.3/contact) +
2D Compatibility (PS) -4441 + (NN) 259 + (LL) 208
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -942.0 ( -5.35 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_2ZKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZKW-query.scw
PDB file :
Tito_Scwrl_2ZKW.pdb
: