Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKQEYKQLPKRAEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPEL----------AIVMGNRFENASTQRSQYGSKSEFLTSEQDAKNCSHAEFLGFGAVSPNYNERMQATPLDYVQEPSKEESKEESPTSPESHKGDENV |
3OR1 Chain:B ((226-291)) | --------------------------------------------------------------------------------------LAVAACPTAAVKPIT--AEVNGQKVKSVAINNDRCMYCGNCYTMCPALPLSDGTGDGIAIMVGGKISNRIKVPSFSKVVVAFVPNEPPRWPTMAKIVKKIVEVYAEDARKYERIGDWIHRIGWETFYEKTGLEFSHHCIDDFRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32585 for 268 contacts (-121.6/contact) +
2D Compatibility (PS) -6161 + (NN) -1666 + (LL) 5796
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -40966.0 ( -152.86 by residue)
QMean score : 0.454
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