Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESY-----TPDFSSPTWYEELQERMQKEYLKHYHELNA |
4FI3 Chain:C ((58-92)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAGQPLEAWSA-TKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1081 for 107 contacts (-10.1/contact) +
2D Compatibility (PS) -3212 + (NN) -1822 + (LL) 13652
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 4837.0 ( 45.21 by residue)
QMean score : 0.163
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