Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKER-DYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW |
1HIW Chain:A ((55-122)) | ------------------------------------------------------SEGCRQILGQLQ-PSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEE----QNKSKKKAQQAAAD------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16755 for 379 contacts (44.2/contact) +
2D Compatibility (PS) -7052 + (NN) -2403 + (LL) 9276
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: 14126.0 ( 37.27 by residue)
QMean score : 0.248
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