Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIAKTAIISPKAEIGKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFIGKNTEIFPFAVLGTQPQDLKYKGEYSELMVGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRGLNRHRMRQLLESKDIDFIHALYKRLFRPIPSLRESAK--LELEEHANNPFVKEICSFILESSRGVAYKSSEYSSEEKQEE
3R0S Chain:A ((6-257))
--KIHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYK---SGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTLFRQ-GDLKENAKNLLENQESEN---VKKMCHFILETKRGIPVYR-----------
General information:
TITO was launched using:
RESULT:
Template:
3R0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -233831 for 2171 contacts (-107.7/contact) +
2D Compatibility (PS) -26640 + (NN) -5807 + (LL) 912
1D Compatibility (HY) -23200 + (ID) 5500
Total energy: -294066.0 ( -135.45 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3R0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R0S-query.scw
PDB file :
Tito_Scwrl_3R0S.pdb
: