Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHVFEVYPKVNVFLKILHK-EGAYHKIISRMCLVKNKLKDIISVKNALSFSLKGDFDCPLEENSLFKALQVLKKFL-VQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVGADTNFFISQYKSANATSYGEVIENFEEESLEDRLEIYAPNHVFCSTKAVYQAYKPETCFFQAKEWLKKTSLECLKTYDRNELNDLLKPALR-----TNPALKDIESQLSKEWFFSGSGSAFFRLKNTQKGANETHCQQ |
| 2V2V Chain:A ((12-246)) | ---------KINLGLWVLGRLPSGYHEILTLYQEIP--FYDEIYIREGV-LRVETNIGIPQEENLVYKGLREFERITGIEINYS-----------IFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLG-KSAIGRGKGEVLEPVETE-ISGKITLVIP-QVSSSTGRVYSSLREE--HFVTPEYAEE-KIQRIISGEVEEIENVLGDIARELYPEINEVYRFVE-YLGFKPFVSGSGSTVYFFGGASEELKKAAKMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102303 for 1826 contacts (-56.0/contact) +
2D Compatibility (PS) -24118 + (NN) -7412 + (LL) 1868
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -153415.0 ( -84.02 by residue)
QMean score : 0.336
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