Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDELRAEKSFPSKPYDSLKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLSVSKKVGNAVKRNLIKRRLRSLVTRHAALC-QGFALVFVPR----SDCYHLDFWALEKHFLEMLTSIKDYMNKALKDLKKGMTHTHAKQ
3Q1Q Chain:A ((47-117))
--------------------------------------------------------------------------LGIVVKRKFGKATRRNKLKRWVREIFRRNKGVIPKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIEG--------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47212 for 350 contacts (-134.9/contact) +
2D Compatibility (PS) -7300 + (NN) -4313 + (LL) 4568
1D Compatibility (HY) -8800 + (ID) 1150
Total energy: -64207.0 ( -183.45 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_3Q1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q1Q-query.scw
PDB file :
Tito_Scwrl_3Q1Q.pdb
: