Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRSISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKK |
2I80 Chain:A ((39-95)) | ----------------------------------------------------------------------------DIIYITNDGDWRKQNNITAEIKSTDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22318 for 284 contacts (78.6/contact) +
2D Compatibility (PS) -5747 + (NN) 663 + (LL) 4932
1D Compatibility (HY) -2800 + (ID) 850
Total energy: 18516.0 ( 65.20 by residue)
QMean score : 0.259
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