Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVINGKNYAE-KTAHQAVVVNVGASWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQDLKESLGIRKIPTLIFYKNAKEVGERLVEPSSQKPIEDALKALL
3HHV Chain:A ((36-134))
----LNSKNFDEFITKNKIVVVDFWAEWCAPCLILAPVIEELANDYP-QVAFGKLNTEESQDIAMRYGIMSLPTIMFFKNG-ELVDQILGAVPREEIEVRLKSLL
General information:
TITO was launched using:
RESULT:
Template:
3HHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60509 for 696 contacts (-86.9/contact) +
2D Compatibility (PS) -10701 + (NN) -2957 + (LL) 572
1D Compatibility (HY) -12000 + (ID) 1900
Total energy: -87495.0 ( -125.71 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_3HHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HHV-query.scw
PDB file :
Tito_Scwrl_3HHV.pdb
: