Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEKIRKILADIEDSQNEIEMLLKLANLSLG-------DFIEIKRGSMDMPKGVNEAFFTQLSEEVERLKELINALNKIKKGLLVF
3J94 Chain:A ((305-371))
----IRKLFADAEEEQRRLG-----ANSGLHIIIFDEIDAIC------------HDTVVNQLLSKIDGVEQLNNIL----------
General information:
TITO was launched using:
RESULT:
Template:
3J94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5059 for 243 contacts (20.8/contact) +
2D Compatibility (PS) -4773 + (NN) 2027 + (LL) 2580
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 443.0 ( 1.82 by residue)
QMean score : 0.161
(partial model without unconserved sides chains):
PDB file :
Tito_3J94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J94-query.scw
PDB file :
Tito_Scwrl_3J94.pdb
: