Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEIDASKKFAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
4INP Chain:A ((2-301)) | --------------------------------EVKVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFKSDIVKATLK--DPERIKPMSSDHAAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQEKTIAEVMEDIDTQAKALEVDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISPLSPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180948 for 2509 contacts (-72.1/contact) +
2D Compatibility (PS) -32075 + (NN) -11550 + (LL) 3204
1D Compatibility (HY) -42000 + (ID) 13400
Total energy: -276769.0 ( -110.31 by residue)
QMean score : 0.638
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