Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINAIHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIHIQYYIFKTDAISTEIRDILVEKAKSGVEVRFMFDGLGSSKLGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKITGQAVIELQESFLNDWVYMENQAGAADGFISESGSKQYFSPVDMGDEWAQVIYGGPYDKEKWVRDSMLDLIDSAKESVWIVSPYFV-PD--EESLAVIRRVAMSGVDVRVIIPGKGDRGISFHGSNAYVKTMIEAGAKMYAYADDSFVHAKAMLVDGTRAAIGTANFDVRSFRLNHELMVFLYDESEAMHHLKRDFKKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL
1BYS Chain:A ((9-143))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YSPEGSARVLVLSAIDSAKTSIRMMAYSFTAPDIMKALVAAKKR----GVDVKIVIDERGNTG---RASIAAMNYIANSGIPLRTDSNFPIQHDKVIIVDNVTVETGSFNFTKAAETKNSENAVVIWN----MPKLAESFLEHWQD------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1BYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64451 for 1018 contacts (-63.3/contact) +
2D Compatibility (PS) -14490 + (NN) -7292 + (LL) 29400
1D Compatibility (HY) -4400 + (ID) 1950
Total energy: -63183.0 ( -62.07 by residue)
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_1BYS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BYS-query.scw
PDB file : Tito_Scwrl_1BYS.pdb: