Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPT----FSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 3GON Chain:A ((2-324)) | -------IAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIYSDMFDFAV------DLRPNPDY-SLIQETIALMGDFLAVRGQNLRPFSLAIYGKM-EREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGF----SISQVKPTLECDFLVGWTKEVAVSSHMVQQI---KQNINQN---FLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLST----DIYTPLLRQLKEASQDLQAVAKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIELL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154094 for 2800 contacts (-55.0/contact) +
2D Compatibility (PS) -35199 + (NN) -17081 + (LL) 2936
1D Compatibility (HY) -26000 + (ID) 5100
Total energy: -234538.0 ( -83.76 by residue)
QMean score : 0.530
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