Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSKVLKSLLLTALLGVTGLISGCGDLTVLNPKGPVAKGQSDLIIYSIIFMLVIVLTIFVLFTIMLVKYRERKDISNYEPDMHGSKKLEIFWTLIPVAIVIALAIPTVKTIYAGEEAPKVTSHKDPIIIYATSADWKWIFSYPDESIETVNYVNIPTDRPVLFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYLQADEVGTYKGRNANFNGEGFADQRFDVVAQSEK-DFKKWAKETKASSPVITQDI--YDRLLIPGSSKKKTYSGTHLAFVDVAADPEYVFYAYKRFGYEMTNPHNPNTKSTISDEPMLPVRPVTVTNPQFERHDMKPQIIKNGEGYHEDKHREDEMKKMEEDIQTNEFNKKESDDAGK |
| 1CYW Chain:A ((125-265)) | ---------------------------------------------------------------------------------------------------------------------------KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK-QSPNTMSDMAAFEKLAAPSEYNQVEY---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38904 for 1016 contacts (-38.3/contact) +
2D Compatibility (PS) -15202 + (NN) -8836 + (LL) 15724
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -60068.0 ( -59.12 by residue)
QMean score : 0.450
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