Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSNG---IKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEMEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
2JZH Chain:A ((9-170))
---NDYMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISK
General information:
TITO was launched using:
RESULT:
Template:
2JZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113513 for 1173 contacts (-96.8/contact) +
2D Compatibility (PS) -17432 + (NN) -6017 + (LL) 8
1D Compatibility (HY) -14400 + (ID) 2800
Total energy: -154154.0 ( -131.42 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2JZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JZH-query.scw
PDB file :
Tito_Scwrl_2JZH.pdb
: