Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKLVHPKA-DVIASNGGVVAVSGE-IIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPPYYFTDEEDKG---------RV--NATKLVAIKSREIFLEHADQFINGIVIEEEDFDKLAVLRSDLEKLSDV-SILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
| 1NF2 Chain:A ((8-260)) | --------DLDGTLLNDNLEISEKDRRNIEKL-SRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKD------NEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLL---------LIDTPERLDELKEILS--ERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLER---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95231 for 1897 contacts (-50.2/contact) +
2D Compatibility (PS) -26818 + (NN) -18752 + (LL) 1896
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -161005.0 ( -84.87 by residue)
QMean score : 0.498
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