Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKKKKFRLFDAVLMAVCVVLVVESAAPAAAIGSSQFFWWIALLILFFLPYGLVSAELGTTYD-DEGGIYDWVKRAFGRKWGARVAWLYWINYPIWMASLAVLFVEVITQIF--PVSFGTPVSILIQ-LIFVWIVVIVSCYPVSDSKWILNIAAFCKVAI--MLCLGVLGIYFAITKGLANDFSGKALLPTFD-LESLSFISVILFNFLGFEVVTTLASDMENPKKQIPQAIIYGGILIAFFYLLAAFGMGAA--IPTSELSTSGGLIDSFIMLIGGVNP----FVIIIGIMFMYTLVANLVSWALGVNYVAMYAAKNKDL-PAVFGKTNPKNDMPTGTSILNGIVASV-LIVAAPLIPNENI-FWAFFALNVVALLGSYILMFPAFLKLRKLDPDRERPFKVPGGKILLYLMTFVPMILLIITLIFSAVP---LNGSSAELNEKIPILIGTIVAVIVGEICIWLAGKRKDKGEIKNEND |
| 4DJK Chain:A ((12-468)) | -----QLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGW---GVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH------------TFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLL--LMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSR-GMYVTAQKNLLPAAFAKMN-KNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDM-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -460929 for 3399 contacts (-135.6/contact) +
2D Compatibility (PS) -41889 + (NN) -18753 + (LL) 3072
1D Compatibility (HY) -43600 + (ID) 5250
Total energy: -567349.0 ( -166.92 by residue)
QMean score : 0.308
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