Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQ----SDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPG-----KMSPDVKRLM--NEIEEYPNVIKNIVTPQV-------ALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSR-TFDAASYLRSLGADTILVQQFLKEDI-----TTFTQ-RSRL----VESLEIYHD---GMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPD--KLIGISARSLGQINV-QVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET
4PY9 Chain:A ((4-337))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVIAQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPNAFPDFLKWMPGSKDILLYDRYQEFAD--KLIMEADVICCLDFNALKRIDEMSDIVAA---------------SPGRKIMIDHHLYPEDFC---RITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGID--------KDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDYNSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE-MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYG-TMEEAVKVFEQALEKY-----


General information:
TITO was launched using:
RESULT:

Template: 4PY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112701 for 2285 contacts (-49.3/contact) +
2D Compatibility (PS) -31830 + (NN) -6743 + (LL) 29168
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -145906.0 ( -63.85 by residue)
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_4PY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PY9-query.scw
PDB file : Tito_Scwrl_4PY9.pdb: