Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQ----SDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPG-----KMSPDVKRLM--NEIEEYPNVIKNIVTPQV-------ALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSR-TFDAASYLRSLGADTILVQQFLKEDI-----TTFTQ-RSRL----VESLEIYHD---GMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPD--KLIGISARSLGQINV-QVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET |
4PY9 Chain:A ((4-337)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVIAQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPNAFPDFLKWMPGSKDILLYDRYQEFAD--KLIMEADVICCLDFNALKRIDEMSDIVAA---------------SPGRKIMIDHHLYPEDFC---RITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGID--------KDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDYNSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE-MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYG-TMEEAVKVFEQALEKY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112701 for 2285 contacts (-49.3/contact) +
2D Compatibility (PS) -31830 + (NN) -6743 + (LL) 29168
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -145906.0 ( -63.85 by residue)
QMean score : 0.441
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