Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL
4XGC Chain:C ((5-143))
---------------------------------------------------------------------YEEYRKAWNQINDHIADLQHRSYARTLEQL
General information:
TITO was launched using:
RESULT:
Template:
4XGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6364 for 113 contacts (56.3/contact) +
2D Compatibility (PS) -3255 + (NN) -1339 + (LL) 5424
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 3994.0 ( 35.35 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4XGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGC-query.scw
PDB file :
Tito_Scwrl_4XGC.pdb
: