Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEVNYREDDWREAKSALAPFAAANWVGGLFNNLEKVSKNMEEAEEDVQELDSDHAISFQHTNYRGKYSAIEDDLMVLYKFSCHAGEKMETLVDQPFYEKLDAFVDGMQDLSISTYSTTNRIGAKSKQTYTTTSGGSQVIESIKEGATIEDLMNGDNFYANQMQLQYRDWQRANPDQDVSKKDFQMGMLHSRAFEYKSIKDEQQEKEFWVNIVATVVIVGVSIFCPPAGLALAVGYGSLEAGSAISGKDWVSGRELSTEERALRGGLALLDIVPGVKALSTGAKAASAGSKLVRVGDNVLAGSKNVGKGTIDNGIQAGKQAMDLRLANAKKVSEAVQKKLTKDLDDIGTMAKTIQNKTKETFTLPPREQLAFARGGSIPEQSATGAAAIAAKKKLKDIMQNMDNLNVKGGGKDDIIEQNKS-LKFT-SLEESEKWGIDGFSVWRNSLSSREIQAIRDYTDIWHYGNMNGYLR------GSVEKLAPDNAERI----KNLSSALEKAELPDNIILYRGTSSEILDNFLDLKNLNYQ-------------NLVGKTIEEKGFMSTTTIS--NQTFSGN---VTMKINAPKGSKGAYLAHFSETPEEAEVLFNIGQKMLIKEVTELNGKIEIIVDLL |
| 4GF1 Chain:A ((174-420)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHVFAKSFALYYEPHYKEALKSYAPALFNYMLELDQMRFKEIS-DDVKEKNKNVLDFKWYTRKAESWGVQTFKNWKENLTISEKDIITGYTG-SKYDPINEYLRKYDGIGGDLDKKSKKALEKIENQIKNLDAALQKSKITENLIVYRRVSELQFGKKYEDYNLRQNGIINEEKVMELESNFKGQTFIQHNYMSTSLVQDPHQSYSNDRYPILLEITIPEGVHGAYIADMSEYPGQYEMLINRG---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30269 for 1322 contacts (-22.9/contact) +
2D Compatibility (PS) -21808 + (NN) 1150 + (LL) 25980
1D Compatibility (HY) -14000 + (ID) 3450
Total energy: -42397.0 ( -32.07 by residue)
QMean score : 0.362
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