Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS-GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKK--LAYEEMQNYIRKNYSDYPFK--DELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 2YZV Chain:A ((8-290)) | -----------------QDRRLGAFLGLAVGDALGAQVEGLPKGTFPE--VREMKGGGPHRLPPGFWTDDTSQALCLAESLLQRGFDPKDQMDRYLRWYREGY------------ATRRALERY---AATGDPYAGDEAGAGNGPLMRLAPLVLAYENHPDL---LSLARRAARTTHGAREALEATEVLAWLLREALRGAPKEALLALE-------------PFRGADLHPALRRVVEGGFWEAPE---EGPGYAPGTLAAALWAFARGRDFEEGMRLAVNLGGDADTVGAVYGQLAGAYYGLGAIPGRWLRALHLREEMEALA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171451 for 2500 contacts (-68.6/contact) +
2D Compatibility (PS) -27404 + (NN) -1775 + (LL) 3592
1D Compatibility (HY) -9600 + (ID) 4300
Total energy: -210938.0 ( -84.38 by residue)
QMean score : 0.468
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