Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
| 2HAC Chain:A ((7-26)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GILFIYGVILT------ALFLRVKFS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5700 for 68 contacts (-83.8/contact) +
2D Compatibility (PS) -2042 + (NN) -301 + (LL) 21988
1D Compatibility (HY) -2800 + (ID) 250
Total energy: 10895.0 ( 160.22 by residue)
QMean score : -0.221
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