Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGR---DEAVDLVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMRMDGMLSNEDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
2ZE3 Chain:A ((8-246))
-----RSFHALHQ--TGFLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDA-TGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDE--ERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVSFGQ-SLMLATLGLVQRM----------
General information:
TITO was launched using:
RESULT:
Template:
2ZE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159329 for 2046 contacts (-77.9/contact) +
2D Compatibility (PS) -26450 + (NN) -13973 + (LL) 1740
1D Compatibility (HY) -13200 + (ID) 4500
Total energy: -215712.0 ( -105.43 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2ZE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZE3-query.scw
PDB file :
Tito_Scwrl_2ZE3.pdb
: