Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLKQLTNQLFTSTIFLVTMLFIIPPTFAIADGS---------KVSFYEYIYGAPLRWLTVISTTEKKGAFLEMFFSENEGINIQWLNLIINFLLVFLVITIIFSLAKKFYNKKNA
3FHA Chain:A ((102-166))
-----------------------IVPPSADVIDASHRNGVPILGNVFFPPTVYGGQLEWLEQMLEQEEDGSF---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FHA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9448 for 159 contacts (-59.4/contact) +
2D Compatibility (PS) -4190 + (NN) -709 + (LL) 7232
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -11065.0 ( -69.59 by residue)
QMean score : -0.095
(partial model without unconserved sides chains):
PDB file :
Tito_3FHA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHA-query.scw
PDB file :
Tito_Scwrl_3FHA.pdb
: