Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFA----SADAEQAERIFERLNKRKQTESRRSNDK
2E5Y Chain:A ((6-107))
--VSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIAVSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRLQSQ-------
General information:
TITO was launched using:
RESULT:
Template:
2E5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67687 for 614 contacts (-110.2/contact) +
2D Compatibility (PS) -10480 + (NN) -772 + (LL) 324
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -83915.0 ( -136.67 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_2E5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E5Y-query.scw
PDB file :
Tito_Scwrl_2E5Y.pdb
: