Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYRTEVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTF-FGRTGSAVELIKRIASKKNLPNKK-DGEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYHAAQPKIV-TCHFQNDANLYGALYNFFLQMDAQNKR |
4HTL Chain:A ((9-290)) | ----FDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEM-KVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTF-------IAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153624 for 2264 contacts (-67.9/contact) +
2D Compatibility (PS) -30756 + (NN) -17732 + (LL) 2152
1D Compatibility (HY) -20000 + (ID) 4400
Total energy: -224360.0 ( -99.10 by residue)
QMean score : 0.470
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