Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGNVIYDIEGERVKLGKGDMLIFNPGVSHYDITEPGMTNAQLHIGFRNFALEGYTRNTFPFKKAFLRKKEEESAILSISKQIIEEKDAGKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQILVNEIIHYMEKHHTE-DVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLTRAEELLKNKDVSVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKSS |
2K9S Chain:A ((5-101)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41289 for 622 contacts (-66.4/contact) +
2D Compatibility (PS) -10417 + (NN) -6268 + (LL) 12628
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -54746.0 ( -88.02 by residue)
QMean score : 0.594
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