Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LYEKLVNKYQDEVTIREEKMPYKLPGLYLNGMIFISKDQSSIEKGCVLVEELMHYKYTVGNITKQETIMDKKQEIFARRKGYEELIPLDDIIACFYLGLREYFEVAEFLEVTEEFLRHTVSHYAEKYGPMYDYGGYFINFGNSIDVYKKF
3E5T Chain:A ((96-161))
---------------------------YEDGGVFTVMQDTSLEDGCLVY----HAKVTGTNFPSNGAVMQKKT------KGWE---PNTEMLYPADGGLRGYSQMA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3E5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6132 for 286 contacts (-21.4/contact) +
2D Compatibility (PS) -6871 + (NN) 2476 + (LL) 6680
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -7797.0 ( -27.26 by residue)
QMean score : 0.015
(partial model without unconserved sides chains):
PDB file :
Tito_3E5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E5T-query.scw
PDB file :
Tito_Scwrl_3E5T.pdb
: