Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDRKANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIEMKKKLHRGM
2OR1 Chain:L ((2-60))
------ISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPR-FLPELASALGVSVDWLL---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20009 for 416 contacts (-48.1/contact) +
2D Compatibility (PS) -6552 + (NN) -3809 + (LL) 4128
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -31742.0 ( -76.30 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_2OR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OR1-query.scw
PDB file :
Tito_Scwrl_2OR1.pdb
: