Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMIDQEEEESQTAWKEKYRFAIHHYTNETDLAGVEKIDTLIQTGFTLPEGYKLIAVRHYGKQNLVKENTLIHAKTSFEVSICRELKVKI |
4J7L Chain:A ((239-293)) | --------------------------------TQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPH----VVAGFRNPEGF-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6221 for 274 contacts (22.7/contact) +
2D Compatibility (PS) -5745 + (NN) -1274 + (LL) 7160
1D Compatibility (HY) -2800 + (ID) 750
Total energy: 2812.0 ( 10.26 by residue)
QMean score : 0.122
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