Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIWIDAGHGGKDSGASGNGL--VEKNWVLTVAKQLQTELVK-AGFEVGMTRTNDTFYELSDRAKKANSFKADLFISLHFNAGGGKGY---EDYIYTSVPAATVEIQKIIHKNIITKVTKHGMNDRGMKKANFAVLRETAMDAILLEAGF-CDSTDALILEKKAYQTDYCLGIVSAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKTLNLTTTKGVPGSWVLKTEVNTGKR
1JWQ Chain:A ((1-174))
MKVVVIDAGHGAKDSGAVGISRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQRSASKA---FANVMHKYFAPAT---GLTDRGIRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITE---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82903 for 1418 contacts (-58.5/contact) +
2D Compatibility (PS) -17912 + (NN) -5308 + (LL) 4496
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -115627.0 ( -81.54 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_1JWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JWQ-query.scw
PDB file :
Tito_Scwrl_1JWQ.pdb
: