Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGS-----PIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFD---EGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKG--TNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHV------------------------PALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQ-----RYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQ---QYLSNQTYFLQISGLKYTFTDTDDL-----DHAYKVASVTTEDGTP----LKTDQKYKVVINDFLFGGGDGFSAFKKANLVT-AIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 4H1S Chain:A ((4-520)) | ----------------------------------------LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-VYKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETP--FLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNP--PSKEVPAGKYPFIVTSDDG-----------------------RKVPVVQAYAFGKYLGYLKIEFDER-GNVISSHGNPILLNS-SIPEDPSIKADINKWRIKLDNY--QELG---KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHTDEMFWNHVSMCILNGGGIRSPIDER-NNGT--ITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVY----DLSRKPGDRVVKLDVLCTKCRVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKM----KVIYPAVEGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109386 for 3921 contacts (-27.9/contact) +
2D Compatibility (PS) -50335 + (NN) -18489 + (LL) 11068
1D Compatibility (HY) -33600 + (ID) 7400
Total energy: -208142.0 ( -53.08 by residue)
QMean score : 0.482
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