Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEETLLERGYRKYRGADVDIYFNTNVCEHSGNCVKGNVELFNLDR---------KPWIMPDNVSKEEAKRVIHTCPSGALQYIEK
1KQG Chain:B ((120-189))
------------QYANGIVD--FQSENCIGCGYCIAGCP--FNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTK
General information:
TITO was launched using:
RESULT:
Template:
1KQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1433 for 286 contacts (5.0/contact) +
2D Compatibility (PS) -6134 + (NN) 190 + (LL) 1544
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -8817.0 ( -30.83 by residue)
QMean score : 0.059
(partial model without unconserved sides chains):
PDB file :
Tito_1KQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KQG-query.scw
PDB file :
Tito_Scwrl_1KQG.pdb
: